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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015883649.1_cds_XP_016438543.1_34193
CDS Infomation

[gene=LOC107764489] [db_xref=GeneID:107764489] [protein=probable 2-oxoglutarate-dependent dioxygenase AOP1.2] [protein_id=XP_016438543.1] [location=complement(join(333..476,804..1125,1713..2035))] [gbkey=CDS]
Sequence

ATGAGCCCAAGTTCAAGTTGTTGGATTTCAACATGCCAAGATGTTAAAAAAGCTTTCGAA
ATCTATGGCTGTTTCTTAGCAATCTATGAAGAAATTTCAATGGAGCAGTGTAAAGAACTT
TTCCGGGAATTGGAGAAGTTGTTTGATTTACCTGTGGAGACCAAAGCTAAAAACACTTCG
AAAATTCCTAATTTTGGTTATATTGGACCAGAATCCTATACTCGGCCTCTTTATGAAAGC
ATGGGAATTGAGAATTCCACCAATCTTGAATCAGTTCAAAGCTTCACAAATCTCATGTGG
CCTTCTGGAAATACTCATTTTTGTGGACTACTTCATTCCCATGCAAAGCAAATGCTGGAA
CTAGACAACATGGTGACAAGAACGATGTTTGCAAGCTATGATGTGGAGAAATATCATGAA
ACATGCGTTAAATCTAAGGGTAACCTTGTTCGTGTCATGAAATATGGAGTTCCAAAGTCC
GATGAGCCTAACGTTGGTCTTCCACCTCATAGTGACAAGGGCTTCACTACTATACTCCAT
CAAAATCAAGTAAATGGTTTGGAAATCGAAACAAAGGATGGCCATTGGATTTCTGTAGAA
TTTCCTCCTTCATCCTTTATTGTTATCGCGGGTGATGCACTTAAGGAATGGAGCAACGAC
AGAATACATGCTGTTACACATAGAGTTACAATGAGTGGAAATGAATCAAGATATTCACTT
GGGCAATTTTCACATCCACAGAAGATAGGAACACTAGAAGAGCTCATTGTTTCATCCTCT
GCAGTTTAA

Peptide Sequence

PEP ID

XP_016438543.1
PEP Infomation

PREDICTED: probable 2-oxoglutarate-dependent dioxygenase AOP1.2 [Nicotiana tabacum]
Sequence

MSPSSSCWISTCQDVKKAFEIYGCFLAIYEEISMEQCKELFRELEKLFDLPVETKAKNTS
KIPNFGYIGPESYTRPLYESMGIENSTNLESVQSFTNLMWPSGNTHFCGLLHSHAKQMLE
LDNMVTRTMFASYDVEKYHETCVKSKGNLVRVMKYGVPKSDEPNVGLPPHSDKGFTTILH
QNQVNGLEIETKDGHWISVEFPPSSFIVIAGDALKEWSNDRIHAVTHRVTMSGNESRYSL
GQFSHPQKIGTLEELIVSSSAV

Transcript Sequence

Gene sequence data has not been registered.